Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVVTAAPAPPVVRLPPAVRGPKLFQGLAFVVSRRRLLGRFVRRYGKAFTANILMYGRVVVVADPQLARQVFTSSPEELG--NIQPNLSRMFGSGSVFALDGDDHRRRRRLLAPPFHGKSMKNYETIIEEETLR-ETANWPQGQA-FATLPSMMHITLNAILRAIFGAGGSELDELRRLIPPWVTLGSRL--AALPKPKRDYGRLSPWGRLAEWRRQYDTVIDKLIEAERADPNFADRT--DVLALMLRSTYDDGSIMSRKDIGDELLTLLAAGHETTAATLGWAFERLSRHPDV--LAALVEEVDNGGHELRQAAIL-EVQRARTVIDFAARRVNPPVYQL----------GEWVIPRGYSIIINIAQIHGDPDVFPQPDRFDPQRYIGSKPSPFAWIPFGGGTRRCVGAAFANMEMDVVLRTVLRHFTLETTTAAGERSHGRGVAFTPKDGGRVVMRRR |
| 4G3J Chain:A ((40-418)) | -------------------------------------------------FTINIVG-KRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRR-DPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172873 for 2804 contacts (-61.7/contact) +
2D Compatibility (PS) -39148 + (NN) -26395 + (LL) 5268
1D Compatibility (HY) -21600 + (ID) 4750
Total energy: -259498.0 ( -92.55 by residue)
QMean score : 0.390
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