Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTELDDVSSLPSSRRTAGDTWAITESVGATALGVAAARAVETAATNPLIRDEFAKVLVSSAGTAWARLADADLAWLDGDQLGRRVHRVACDYQAVRTHFFDEYFGAAVD-AGVRQVVILAAGLDA--RAYRLNWP--AGTVVYEIDQ-PSVLEYKAGILQSHGAVPTARRHAVAVDLRD-DWPAALIA--AGFDGTQPTAWLAEGLLPYLPGD-AADRLFDMVTALSAPGSQVAVEAFTMNTKGNTQRWNRMRERLGLDIDVQA-LTYHEPDRSDAAQWLATHGWQVHSVSNREEMARLGRAIPQDLVDETVRTTLLRGRLVTPAQPA |
3GIW Chain:A ((58-244)) | -------------------------------------------------------------------------------------------HMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP---EGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQ--EVGRVAR---EYAARNMPMRLRTH--AEAEEFFE--GLELVEP-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93557 for 1263 contacts (-74.1/contact) +
2D Compatibility (PS) -18730 + (NN) -904 + (LL) 9944
1D Compatibility (HY) -6800 + (ID) 1450
Total energy: -111497.0 ( -88.28 by residue)
QMean score : 0.336
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