Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLNDIQVWTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRGGRAMVQSPILKQAFALDDGSCLDDP-RVSVPVYPARVTPEGRIQVARVAV
2QPZ Chain:A ((2-103))
-------VKWIEAVALSDILEGDVLGVTV-EGKELALYEV-EGEIYATDNLCTHGSA-RMSDGYLEG----REIECPLHQGRFDVCTGKALCAPVTQNIKTYPVKIEN-LRVMIDLS--
General information:
TITO was launched using:
RESULT:
Template:
2QPZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72328 for 763 contacts (-94.8/contact) +
2D Compatibility (PS) -11280 + (NN) -6743 + (LL) 948
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -97003.0 ( -127.13 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_2QPZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QPZ-query.scw
PDB file :
Tito_Scwrl_2QPZ.pdb
: