Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAMARAIRSGDDAEVADGLTRREHDILAFERQWWKFAGVKEEAIKELF-----SMSATRYYQVLNALVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFEVT
3MWM Chain:A ((10-62))
------------------GRATRQRAAVSAALQEV--EEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAG----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16336 for 279 contacts (-58.6/contact) +
2D Compatibility (PS) -5468 + (NN) -2909 + (LL) 5104
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -21209.0 ( -76.02 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_3MWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MWM-query.scw
PDB file :
Tito_Scwrl_3MWM.pdb
: