Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVLLTGAAGFIGSRVDAALRAAGHDVVGVDALL-PAAHGPNPV-LPPGCQ----RVDVRDASALAPLLAG---VDLVCHQAAMVGAGVNAADAPAYGGHNDFATTVLLAQMFAAGVRRLVLASSMVVYGQG-RYD----CPQHGPVDPLPRRRADLDNGVFEHRCPGCGEPVIWQLVDEDAPLRPRSLYAASKTAQEHYALAWSEASGGSVVALRYHNVYG---PGM----PRDTPYSGVAAIFRSAVEKGKPPKVF------EDGGQMRDFVHVDDVAAANLAAVHLGEADRDGFTAVNVCSGRPISILQVATAICDARGGSMSPAITGHYRSGDVRHIVADPARAARVLGFRAAVDPGEGLREFAFAPLR |
| 4LIS Chain:A ((6-335)) | --VLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAEALNRIELISGKKAEFAQLDVTDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVTNIVFSSSATVYGDATRFPDMIPIPEHCPLGP---------------TNPYGNTKFAIELAITDVINAQRN--NAKKAGNETEAAKWNGA------LLRYFNPAGAHPSGIMGEDPQGVPYNLLPLLAQVATGKREKLLVFGDDYASHDGTAIRDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTVYEMIRAFSKAVGRDL-PYEVAPRRAGDVLNLTSNPTRANTELGWKA----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162255 for 2453 contacts (-66.1/contact) +
2D Compatibility (PS) -31955 + (NN) -2596 + (LL) 2204
1D Compatibility (HY) -17200 + (ID) 5000
Total energy: -216802.0 ( -88.38 by residue)
QMean score : 0.367
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