Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
3H87 Chain:A ((21-140))
WLIDKSALVRLTDSP-DMEIWSNRIER-GLVHITGVTRLEVGFSAECGE-IARREFREPPLS--AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA------
General information:
TITO was launched using:
RESULT:
Template:
3H87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40800 for 860 contacts (-47.4/contact) +
2D Compatibility (PS) -12644 + (NN) -187 + (LL) 424
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -57657.0 ( -67.04 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_3H87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H87-query.scw
PDB file :
Tito_Scwrl_3H87.pdb
: