Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPERQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVVSDALGRYSQRTGEDD
4B8X Chain:A ((18-107))
----------------QILLGEVDAVVKPYGLTFARYEALVLLTFSKSGELPMSKIGERLMVHPTSVTNTVDRLVRSGLVAKRPNP----GTLATITDKGREVVEA-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4B8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38173 for 616 contacts (-62.0/contact) +
2D Compatibility (PS) -8872 + (NN) -2110 + (LL) 4672
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -47233.0 ( -76.68 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_4B8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B8X-query.scw
PDB file :
Tito_Scwrl_4B8X.pdb
: