Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGR-------------------------------GRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFARALRALGK
1S3G Chain:A ((1-200))
MNIVLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPDEVTIGIVRERLSKSDCDNGFLLDGFPRTVPQAEALDQLLADMGRKIEHVLNIQVEKEELIARLTGRRICKVCGTSYHLLFNPPQVEGKCDKDGGELYQRADDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLVNINGQKD------------
General information:
TITO was launched using:
RESULT:
Template:
1S3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41766 for 1251 contacts (-33.4/contact) +
2D Compatibility (PS) -18928 + (NN) -15505 + (LL) 1304
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -93445.0 ( -74.70 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1S3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3G-query.scw
PDB file :
Tito_Scwrl_1S3G.pdb
: