Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDP------EPPEEARGVIKHAVWACPTQALSIRETGE
1IQZ Chain:A ((2-71))
--KYTIVDKETCIACGACGAAAPDIYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADE--
General information:
TITO was launched using:
RESULT:
Template:
1IQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34110 for 450 contacts (-75.8/contact) +
2D Compatibility (PS) -6725 + (NN) -4591 + (LL) -32
1D Compatibility (HY) -800 + (ID) 600
Total energy: -46858.0 ( -104.13 by residue)
QMean score : 0.665
(partial model without unconserved sides chains):
PDB file :
Tito_1IQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IQZ-query.scw
PDB file :
Tito_Scwrl_1IQZ.pdb
: