Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSGAGSDATGAGGVHAAGSGDRAVAAAVERAKATAARNIPAFDDLPVPADTANLREGADLNNALLALLPLVGVWRG--EGEGRGPD-GDYRFGQQIVVSHDGGDYLNWESRSWRLTATGDYQEPGLREAGFWRFVADPYDPSESQAIELLLAHSAGYVELFYGRPRTQSSWELVTDALARSRSGVLV--GGAKRLYGIVEGGDLAYVEERVDADGGLVPHLSARLSRFVG |
3IA8 Chain:A ((1-162)) | ---------------------------------------------------------PPKMNPVVEPLSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDT----RKPMHRECGFIRLK------PDTNKVAFVSAQNTGVVEVEEGEVNG-QELCIASHSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKVT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47210 for 1129 contacts (-41.8/contact) +
2D Compatibility (PS) -16324 + (NN) -4567 + (LL) 2212
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -72239.0 ( -63.98 by residue)
QMean score : 0.341
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