Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVHAW
4FOP Chain:A ((1-190))
MSNISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGP-NFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQGQVPQAMNQINAY
General information:
TITO was launched using:
RESULT:
Template:
4FOP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122785 for 1639 contacts (-74.9/contact) +
2D Compatibility (PS) -20112 + (NN) -2651 + (LL) 64
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -162834.0 ( -99.35 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_4FOP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FOP-query.scw
PDB file :
Tito_Scwrl_4FOP.pdb
: