Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDDVPEQWSHYTQINADFFAELGSPGGAAKVGMTENDPQAVKDLAPQSEDA
6FD1 Chain:A ((2-74))
--FVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAEL---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
6FD1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64100 for 506 contacts (-126.7/contact) +
2D Compatibility (PS) -7361 + (NN) -5715 + (LL) 1460
1D Compatibility (HY) -10000 + (ID) 1850
Total energy: -87566.0 ( -173.06 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_6FD1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-6FD1-query.scw
PDB file :
Tito_Scwrl_6FD1.pdb
: