Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTRRFAASMVGTTLTAATLGLAALGFAGTASASSTDEAFLAQLQADGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAKATGLSAKGAKTFAVDAASAYCPQYVTSS
2MI2 Chain:A ((1-104))
MFDIGFSELLLVFIIGLVVLGPQRL-----PVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQDSLKKVEKASL--TNLTPELKASMDELRQAAESMKRSYVANDPLEH
General information:
TITO was launched using:
RESULT:
Template:
2MI2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8543 for 475 contacts (18.0/contact) +
2D Compatibility (PS) -10368 + (NN) 2700 + (LL) 380
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -2345.0 ( -4.94 by residue)
QMean score : 0.141
(partial model without unconserved sides chains):
PDB file :
Tito_2MI2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MI2-query.scw
PDB file :
Tito_Scwrl_2MI2.pdb
: