Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVTVSIPTILRPHTGGQKSVSAS-GDTLGAVISDLEANYSG-ISERLMDPSSPGKLHRFVNIYVNDEDVRFSGGLATAIADGDSVTILPAVAGG
2G1E Chain:A ((1-90))
-MVTVRYYATLRPITK-KKEETFNGISKISELLERLKVEYGSEFTKQMYDG---NNLFKNVIILVNGNNITSMKGLDTEIKDDDKIDLFPPVAGG
General information:
TITO was launched using:
RESULT:
Template:
2G1E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54407 for 605 contacts (-89.9/contact) +
2D Compatibility (PS) -9955 + (NN) -5570 + (LL) -160
1D Compatibility (HY) -8000 + (ID) 1350
Total energy: -79442.0 ( -131.31 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2G1E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G1E-query.scw
PDB file :
Tito_Scwrl_2G1E.pdb
: