Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPLAPVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVKALVIACNSASSACLRDARERYQ-VPVVEVILPAVRRAVAATRNGRIGVIGTRATITSHAYQDAFAAAR-DTEITAVACPRFVDFVERGVTSGRQVLGLAQGYLEPLQRAEVDTLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFEATGDPEAFTKLAARFLGPVLGGVQPVHPSRIH
3OUT Chain:A ((9-253))
------PIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVS---LVDNLNTVGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSYFHDKNIQALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTK-NPEYR-FYVTDIPLKFRSVGEMFL----------------
General information:
TITO was launched using:
RESULT:
Template:
3OUT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -232955 for 2192 contacts (-106.3/contact) +
2D Compatibility (PS) -26807 + (NN) -13284 + (LL) 1296
1D Compatibility (HY) -22800 + (ID) 4250
Total energy: -298800.0 ( -136.31 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_3OUT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OUT-query.scw
PDB file :
Tito_Scwrl_3OUT.pdb
: