Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWRYPLSTRLALPNTPGVASFAMTSSPSTVSTTLLSILRDDLNIDLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEELLTCDTVGELEAAIAAKYRDE
4IHF Chain:G ((3-68))
--------------------------MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTV--------------
General information:
TITO was launched using:
RESULT:
Template:
4IHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38457 for 395 contacts (-97.4/contact) +
2D Compatibility (PS) -6998 + (NN) -3550 + (LL) 2796
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -51159.0 ( -129.52 by residue)
QMean score : 0.739
(partial model without unconserved sides chains):
PDB file :
Tito_4IHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IHF-query.scw
PDB file :
Tito_Scwrl_4IHF.pdb
: