Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRSGHPVTLDDLPLRADLRGKAPYGAPQL---AVPVRLNTNENPHPPTRALVDDVVRSVREAAIDLHRYPDRDAVALRADLAGYLTAQTGIQLGVENIWAANGSNEILQQLLQAFGGPGRSAIGFVP-SYSMHPIISDGTHTEWIEASRANDFGLDVDVAVAAVVDRKPDVVFIASPNNPSGQSVSLPDLCKLLDVAPGIAIV--DEAYGEFSSQPSAVSLVEEYPSKLVVTRTMSKAFAFAGGRLGYLIATPAVIDAMLLVRLPYHLSSVTQAAARAALRHSD--DTLSSVAALIAERERVTTSLNDMGF--RVIPSDANFVLFGEFADAPAAWRRYLEAGILIRDVG----IPGYLRATTGLAEENDAFLRASARIATDLVPVTRSPVGAP |
| 1FG3 Chain:A ((4-350)) | -------VTITDLA-RENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQQT----------LNRYPECQPKAVIENYAQY----AGVK--PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQ-GISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYP-HLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYIL-ARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164289 for 2718 contacts (-60.4/contact) +
2D Compatibility (PS) -36666 + (NN) -23982 + (LL) 3176
1D Compatibility (HY) -26400 + (ID) 5800
Total energy: -253961.0 ( -93.44 by residue)
QMean score : 0.415
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