Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASAVIADLSGQVLTAVTARRPSQLAAQRDAAAVLITRGLDG--LRPYFTGYLPTLLLAAILTPATVAVIG---LYDLKSMAIVVITLPLIPIFMVLIGLATT---NPSAAALAAMTAVQARLLDLIAGIPTLRALGRASGPEQ----RIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEVYWPLRRVG-----VQFHAAADGRTAADKAFALLGESPSPTPGRRTVTARGGVIRLERLSVRGRDGRAP--YDLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGP---VDDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR |
| 4S0F Chain:A ((255-693)) | -------------------------------------------------------------------------------------KLPMNFFNSRKVGEI-ISRFMDASKIRQAISGATLTIMIDTIM-----AVIGGILLY-IQNSSLFFISFIIILLYGIIVTVFNKPIQNANRQIMEDNAKLTSALVESVKGIETIKSFGAEEQTEKSTRDKIETVMKSSFKEGMLYINLSSLTGIV----AGLGGIVILWAGAYNVIKGNMSGGQLLAFNALLAYFLTPVKNLIDLQPLIQTAVVASNRLG--EILELATEKELREDSDDFVISLKGDIEFRNVDFR-YGLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRKKIAFVSQDVFIFSGTVKENLCLGNENVDMDEIIKAAKMANAHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKKPDILILDQATSNLDSITENHIKDAIY-GLEDDVTVIIIAHRLSTIVNCDKI---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S0F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197859 for 3000 contacts (-66.0/contact) +
2D Compatibility (PS) -45665 + (NN) -26273 + (LL) 8276
1D Compatibility (HY) -32800 + (ID) 5200
Total energy: -299521.0 ( -99.84 by residue)
QMean score : 0.357
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