Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGV----------AGLDQ-------VPAM-QEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTSR
3HA9 Chain:A ((37-168))
---------------------------------------------EVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRSIDYIVIMDKSSNV----------------------
General information:
TITO was launched using:
RESULT:
Template:
3HA9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73276 for 726 contacts (-100.9/contact) +
2D Compatibility (PS) -12254 + (NN) -4232 + (LL) 4880
1D Compatibility (HY) -12400 + (ID) 1550
Total energy: -98832.0 ( -136.13 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_3HA9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HA9-query.scw
PDB file :
Tito_Scwrl_3HA9.pdb
: