Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASDLYLGYRNDDADTPFGKFFKPEMAPLPQ----HVVVALQHGPQAGMALLAFDDAASIVDEGYQQTENGYGILGDGSMQVSVRTDMPGVTPAMWAWWFGWHGSDTRRYKLWHPRAHLSARWKDGDQDSGAGRRGAQRYVGRWSMISEYIGSTKLGAAIQFVEPAAMGLPDDSDDTVSICARLGSADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVASKAVRPIASKLIGVSESTARNLLVYCAQEMNHLAGFLADLWESFGDE |
3TK2 Chain:A ((37-103)) | ----PLDRYSAEDHAT-WATLYQRQCKLLPGRACDEFMEGLERLEVDADRVPDFNKLNQKLM-----AATGWKIVAV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15460 for 314 contacts (-49.2/contact) +
2D Compatibility (PS) -6546 + (NN) -1129 + (LL) 11704
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -15881.0 ( -50.58 by residue)
QMean score : -0.065
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