Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTCEMRESALARLGRALADPTRCRILVALLDGVCYPGQLAAHLGLTRSNVSNHLSCLRGCGLVVATYEGRQVRYALADSHLARALGELVQVVLAVDTDQPCVAERAASGEAVEMTGS
2KKO Chain:A ((15-96))
----------VARVGKALANGRRLQILDLLAQGERAVEAIATATGMNLTTASANLQALKSGGLVEARREGTRQYYRIAGEDVAR-LFALVQVV-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KKO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82156 for 566 contacts (-145.2/contact) +
2D Compatibility (PS) -8820 + (NN) -3038 + (LL) 2948
1D Compatibility (HY) -3600 + (ID) 1600
Total energy: -96266.0 ( -170.08 by residue)
QMean score : 0.735
(partial model without unconserved sides chains):
PDB file :
Tito_2KKO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KKO-query.scw
PDB file :
Tito_Scwrl_2KKO.pdb
: