Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIVRRGDSAFVGSVVSAEVDPSVLPGLVVSSQDAARSAPEAGDAAPLLADTGEP--DDWDAPVPGTGAGVFTGIAGSLSRG-FR-GAD--RLYGYAHRSVSTTFLASSTGLRRRYTQPTGAIEINAKRGDA---SAWVGIGTPDFVEVPIDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLGWSMAGRGAQEGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGLAC-TPFVAVSNSSETQSVFDNGMEISQVDWIRSGVINALAYPRATAAKFDAPVAVAA-------DNLIMTGGSADLADMIAGTERGLLLTTLWYIRE-VDPTTLLLTGLTRDGVYLVEDGEVSAAVNNFRFNESPLDLLRRATEAGVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ |
| 1VL4 Chain:A ((5-433)) | -----EFKDRLFALAKK-NGV-EVQISFLETREFSLRLANGDLDQYTDAGKFNVEIKVLKDGK----TGTFRTQVLE--NPEKCFEEALSNLQVK----KEYFFEGGKEYREMETYVGRFEKLSVKEKMDMAKKAHESAAKDERVVMVPTVMYKDMVIKKIITNTLGLDVESQMDGGFLFAMAIARDANPRSGSWYELARTPEDLNPEEIGKRAAEEAISLIGSKTIPSGKYPVLMRNTALLDLMEMFIPMISAENVQKNLSPLK-GKL----GEQVGNPAVSIKDLPYHPKGLSSTPFDD------------EGVPTTEKFVLENGVLKTFLHNLKTARKEGVEPTGNGFVGGIRPVNLMLMPGEKSFEELLKEMDRGVVITEVEGMHAGANSISGEFSLFA-KG-YWVENGEIAHGVEDITISGNFLDLLRKIVLVGNDVKVSQ--------HTIAPSVLVEVLDVA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170273 for 3378 contacts (-50.4/contact) +
2D Compatibility (PS) -42693 + (NN) -10197 + (LL) 2640
1D Compatibility (HY) -8400 + (ID) 3050
Total energy: -231973.0 ( -68.67 by residue)
QMean score : 0.405
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