Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRSREEYFNLPLKVDESSGTIGKMFVLVIYDISDN-----RRRASLAKILAGFGYRVQESAFEAMLTKGQLAKLVARIDRFAID-CDNIRIYKIRGVA--AVTFYGRGRLVSAEEFVFF
4QR2 Chain:A ((1-83))
-------------------------MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLG-------------
General information:
TITO was launched using:
RESULT:
Template:
4QR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65231 for 467 contacts (-139.7/contact) +
2D Compatibility (PS) -8139 + (NN) -2994 + (LL) 2368
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -81596.0 ( -174.72 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_4QR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QR2-query.scw
PDB file :
Tito_Scwrl_4QR2.pdb
: