Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLRLVSPIKAFADGIVAVAIAVVLMFGLANTPRAVAADERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLN-DADG---VIWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALTS
1KNG Chain:A ((61-170))
---------------------------------------EGLQADNVQVPG--LDPAAFKGKVSLVNVWASWCVPCHDEAPLLTEL-GKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVP--ETFVVGR-EGTIVY----------------------
General information:
TITO was launched using:
RESULT:
Template:
1KNG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69450 for 729 contacts (-95.3/contact) +
2D Compatibility (PS) -11351 + (NN) -4354 + (LL) 5732
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -89923.0 ( -123.35 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1KNG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KNG-query.scw
PDB file :
Tito_Scwrl_1KNG.pdb
: