Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTQATPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGAGFATG--TKWSFIPQGDTGAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFRSMGSEKSPGFTLYSLSGH-VTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTPLLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFW--LDKIYERLETGRGSHEDIDKLLDIS-DSIL--GKSFCALGDGAASPVMSSIKHFRDEYLAHVEGGGCPFDPRDSMLVANGVDA |
| 4P6V Chain:A ((115-447)) | -------------------------------------------SLNRDAIKTQLVESGLWTA----FRTRPFSKVPAI-D------STSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAGLDVLSA-LTTGKVYVCKKGTSLPR---S----Q---------------QPNVEEHVF--DGPHPAGLAGTHMHFLYPVS----------A-----DHVAWSINYQDVIAVGQLFLTGELY----------TQRVVSLAGPVVNKPRLVRTVMGASLEQLVDSEIM-P---GEVRIISGSVLSGTKATG-PHAYLGR----------YHLQVSVLREG--------------------PIGNYEKVMPLDMEPTLLLRDLC----AGDSDSAVRLGALELDEEDLALCTFVCPGKYEYGQLLRECLDKIEK----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137619 for 2294 contacts (-60.0/contact) +
2D Compatibility (PS) -29278 + (NN) -6857 + (LL) 6744
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -177110.0 ( -77.21 by residue)
QMean score : 0.319
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