Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANEPAIGAIDRLQRSSRDVTTLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFA-VEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVELGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH-- |
3HAM Chain:A ((1-299)) | ----------------------MVNLDAEIYEHLNKQIKINELRYLSS----GDDSDTFLCN-----------EQYVVKVPKRD-----------SVRISQKREFELYRFLENCKLSYQIPAVVYQSDRFNIMKYIKG--------ERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILNN--AVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDND---FLCLLDCSTDDFGKEFGRKVLKYYQHKAPEVAERKAELNDVY---------------------WSIDQIIYGYERKDREMLIKGVSELLQTQAEMFIF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122620 for 2247 contacts (-54.6/contact) +
2D Compatibility (PS) -31336 + (NN) -7207 + (LL) 5728
1D Compatibility (HY) -10000 + (ID) 1800
Total energy: -167235.0 ( -74.43 by residue)
QMean score : 0.329
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