Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPV--NDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP |
3MKQ Chain:B ((642-818)) | ----------------------------ALQFVQDPHIRFDLALEYGNLDAALDEAKKLNDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQT----REDFGSMLLNTFYNNSTKERSSIFAEGGS---------LPLAYAVAKANGDEAAASAFLEQAEVDEQDVTLPDQMDASNFVQRPVISKPLEKWPLKEA----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18760 for 1201 contacts (-15.6/contact) +
2D Compatibility (PS) -18208 + (NN) -6650 + (LL) -192
1D Compatibility (HY) 1200 + (ID) 1000
Total energy: -43610.0 ( -36.31 by residue)
QMean score : 0.244
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