Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLR-EHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSL---RQLDELLHAVRRTGRTATVTVKVDT-GLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR |
| 4DYJ Chain:A ((48-397)) | ---------------------------------------VSASALQHNIRTLQAELAGKSRLCAVLKADAYGHGIGLVMPSIIAQGVPCVAVASNEEARVVRASGFTGQLVRVRLASLSELEDALQYDMEELVGSAEFARQVDAI---AARHGKTLRIHMALNSSGMSRNGVEMATWSGRGEAL-QITDQKHLKLVALMTHFAVEDKDDVRKGLAAFNEQTDWLIKHAKLDRSKLTLHAANSFATLEVPEARLDMVRTGGALFG-DTVPARTEYQ--RAMQFKSHVAAVHSYPAGNTVGYDRTFTLARDSRLANITVGYSDGYRRVFTNKGHVLINGHRIPVVGKVSMNTLMVDVTDFP-DVKGGNEVVLFGKQAGGEITQAEMEEINGALLADLYT---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182239 for 2813 contacts (-64.8/contact) +
2D Compatibility (PS) -37612 + (NN) -13112 + (LL) 3776
1D Compatibility (HY) -18800 + (ID) 6000
Total energy: -253987.0 ( -90.29 by residue)
QMean score : 0.326
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