Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPEGALYLRMDDFPARLVVVPGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYG--HRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGG-FDIEFGCEGRQVDDRDWIARESTAVSLWGHDFTVGARG |
1KWC Chain:B ((1-288)) | -SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGDAALY-RADQRAWRIAVQPGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGAFVRCVPDTAKAMAFYTEVLGFVLSDIIDI--QM--GPETSVPA--HFLHCNGRHHTIALAAFPIPKRIHHFMLQANTIDDVGYAFDR-LDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGPRTVDSSWTVARHSR-TAMWGHKSV----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138806 for 2425 contacts (-57.2/contact) +
2D Compatibility (PS) -31141 + (NN) -19634 + (LL) 836
1D Compatibility (HY) -19200 + (ID) 5400
Total energy: -213345.0 ( -87.98 by residue)
QMean score : 0.515
|
|
|