Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGGRRRGRSGSG--RGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAT
3WHU Chain:A ((19-105))
-------------------------PHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGADGLAIWYA--
General information:
TITO was launched using:
RESULT:
Template:
3WHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12260 for 421 contacts (29.1/contact) +
2D Compatibility (PS) -8559 + (NN) -1064 + (LL) 1860
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -453.0 ( -1.08 by residue)
QMean score : 0.088
(partial model without unconserved sides chains):
PDB file :
Tito_3WHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WHU-query.scw
PDB file :
Tito_Scwrl_3WHU.pdb
: