Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNHSPAELEARLRLHGLPELGPMRFLRLIEAFGSASSALAAPASAWRTLGVPAEAAAARRSPAVREAAGEALRWLEGLRRHLLMWDDPGYPALLAEVADAPPLLYVEGAPETLE---RPQLAMVGSRRASPAGLGTARSFARSLAQGGFAITSGLALGIDGAAHEGALEAGGATVAVLGTGLRRLYPRRHEALARRIVEGGGALVSELPLDSPPLPANFPRRNRIISGLSLGVLVVEASPASGSLITARLAAEQGREVYAIPGSIHHPGARGCHQLIRDGALLVESVGHVLEALRGWAQAEPAEAPAQPLPHPLLALLRAAPYTSEGLAAASGMTLPDVLATLSELELDGRVACEAGTWVHRSG |
3MAJ Chain:A ((16-381)) | --VLTEAQRIDWMRLIRAENVGPRTFRSLINHFGSARAALERLPELARRGGA---ARAGRI--PSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALAVMARPMIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVASILE----GEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201994 for 3013 contacts (-67.0/contact) +
2D Compatibility (PS) -37217 + (NN) -14220 + (LL) 236
1D Compatibility (HY) -18400 + (ID) 7400
Total energy: -278995.0 ( -92.60 by residue)
QMean score : 0.554
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