Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRWLGVALGCSGLAIALACAGVLLAPADMAASSSSPSPARTVAALPAVDDRPPPPAPVRSQAAAPAYEAEPPVAELDREQAIQFMQMLRDEGDPRSPPLGGLQP--RQGATAQELADPKQYQAFEERQTRELVQAYTSGVQQIPEIRARIEAAEQGGERSAEEIDEARAALGQLEMMRDKLQR---ESPQLLPGDSAPTSPAAP |
| 1WBD Chain:A ((322-421)) | ----------------------------------------------------------------------------LERQQTIGALQDFT----------AGLQPVLRQVGDLERILARLALRTARPRDLARMRHAF----QQLPELRAQLETVD------SAPVQALREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1928 for 548 contacts (3.5/contact) +
2D Compatibility (PS) -10499 + (NN) -2655 + (LL) 4004
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -14272.0 ( -26.04 by residue)
QMean score : 0.396
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