Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKMLAASLLLWMFSLTAQADCAVLGPGEDPCAGPVLGPTVCECP
1EKE Chain:A ((11-19))
---------------------------------RGPVLGPMVVCAF
General information:
TITO was launched using:
RESULT:
Template:
1EKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 464 for 19 contacts (24.4/contact) +
2D Compatibility (PS) -1002 + (NN) -2029 + (LL) 2664
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -1453.0 ( -76.47 by residue)
QMean score : 0.674
(partial model without unconserved sides chains):
PDB file :
Tito_1EKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EKE-query.scw
PDB file :
Tito_Scwrl_1EKE.pdb
: