Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSIYQASIPTFLRTLGNLSAILKKAAAHAEAKNIDPRIFIDARLAPDMFPLARQVQIASDAAKGAGARLAGLEVPSYADTETTFDELQARIARTVEFLEGIREEQLDGAEERNVTLKVRGQEISFNGRDFLFGFALPNFFFHVTTAYAILRHNGVELGKMDFLGGA |
3D7G Chain:A ((580-657)) | --------------------------------------------------------------------------EMKTYS---VSFDSLFSAVKNFTEIASKFSERLQDF--SNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D7G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1484 for 330 contacts (-4.5/contact) +
2D Compatibility (PS) -8037 + (NN) -2146 + (LL) 6256
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -9961.0 ( -30.18 by residue)
QMean score : -0.004
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