Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPLTRLVPLALLLLAGCAGPLPQPDPQMAWVELRSAPANTLLAERLDGERLSDGRYFQVTPGRHVLEVRFQYELYGGSGGGGGGFGEPVQINCYQQVVYDGFEAGRRYRLEVRPQLR-----RALALLSDERGEVVARSNFQTSRCPPY |
3BBJ Chain:A ((216-267)) | -------------------------------------------------------------------------------------------PTVELTWHLRAIPEPGPLAFRSTCALVSDGWFDENVDLWDARGRLVAQSRQLARVGR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3886 for 240 contacts (16.2/contact) +
2D Compatibility (PS) -4684 + (NN) 999 + (LL) 4288
1D Compatibility (HY) -1200 + (ID) 400
Total energy: 2889.0 ( 12.04 by residue)
QMean score : 0.149
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