Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQPSENRLITSARYALCLLTASGVLLSGCASSGVGSVAQTTRAEYYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGGLASDENRGRNAALAAAGGALAGGAAGYYMEKQKQISDDRARIGSYGTDVDRSTVEINRSVAYAKSAQSCYQSQFKAL-LDGRKNKSINEAEGRKRLAEIVSGLQETNA-LLVAANGRAGENIS-----NYTQAYEKDLQQVGVPRAEVTKVAEAENRASTTKGGSKPKTGSNPKVPKEAVATEQTIRKAQDAQSEGNKVASQGQGMIREVCNSPDMGDWAPPSCAKA |
| 3S06 Chain:A ((33-99)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------LLFENATSDA------INQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDNEFNPH-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5269 for 284 contacts (18.6/contact) +
2D Compatibility (PS) -6370 + (NN) -1152 + (LL) 9592
1D Compatibility (HY) 0 + (ID) 250
Total energy: 7089.0 ( 24.96 by residue)
QMean score : 0.223
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