Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELGAAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGLVGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISGNLLRSEAVTPAQRLAALAQHACDGASHWW--GRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVIPLFPGIPG |
2LN3 Chain:A ((1-83)) | --------------------------------------------------------------------------------------------------------------------MGLTRTITSQNKEELLEIALKFISQ---GLDLEVEFDSTD--DKEIEEFERDMEDLAKKTGVQIQKQWQGNKLRIRLKGSLEHHHHHH------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2555 for 534 contacts (4.8/contact) +
2D Compatibility (PS) -8620 + (NN) -781 + (LL) 6468
1D Compatibility (HY) -800 + (ID) 700
Total energy: -1878.0 ( -3.52 by residue)
QMean score : 0.170
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