Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSWNNRVVWSEGMFLRPQHFQQHDRYLETLVDGRCRSLLAGGWGFSELKLDDA----LLTQGKL----AIVSARGVLPDGTPFNIPADDPAPAPLNVEESLRDGIVYLGLPLKRVGTRDTVEEGEALGGARYVSQVQEVRDDNAAFESRAPVALGSQAFRLLTERDGLGEYAAVGVARVREKRADQALSLDEDYLPPVLDIAAAPPLASFAKELLGLLHQRGEALAGRVVASSAGGASEIADFLLLQLVNRAEALTGHLSRVRPLHPQELYRELVALA-----GEFCTFT-ASQRRPEEYPVYNHDDLAASFAPVMLALRQ-ALATVIDAKAIAIPIVEKAYGVHVAMLSDRSLIDNASFVLVVRADVPGESLRGHFPQQ-AKVGSVEHIRDLVNLQLPGIGLLPMPVAPRQIPYHAGSTYFELDRGSAHWKQLTHSGGFAFHIAGQFPGLNLAFWAIRG |
| 4ZOX Chain:A ((3-381)) | MSNNS-----------LTYFDKHTDSVFAIGHHPNLPLVCTGGGDNLAHLWTSHSQPPKFAGTLTGYGESVISCSFTSEG-GFLVTAD-------------MSGKVLVHMGQKGGAQWKLASQMQEVEEIVWLKT-HPTIARTFAFGATD----GSVWCYQINEQDGSLEQLMSGF--VHQQDCSMGEFINTDKGENTLELVTCSLDST-----IVAWNCFTGQQLFKITQAEIKGLE--APWISLSLAP--ETLTKGNSGVVACGSN---NGLLAVINCNNGGAILHLSTVIELKPEQ------DELDASIESISWSSKFSLMAIGLVCGEILLYDTSAWRVRHKFVLED-----SVTKLMFDNDDLFASCINGKVYQFNARTGQEKFVCVGHNMGVLDFILLH-PVA---------------NTGTEQKRKVITAGD---------EGVSLVFEVPN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72623 for 3146 contacts (-23.1/contact) +
2D Compatibility (PS) -37084 + (NN) 6492 + (LL) 6272
1D Compatibility (HY) -8800 + (ID) 3500
Total energy: -109243.0 ( -34.72 by residue)
QMean score : 0.079
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