Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGEAGQPSEPLNLLAGMAAAPWDYDFFQALRRIECESPQLPRLGHSVRLADDPLRLGQKPDCTFAPSTLASVSQAGTAAVPRLDQFFFGLTGPNGPLPLHLTEYARERQRNVNDATFKR-FMDVFHHRLLTLFYRAWAEARPEISHDRI--DDDYWSARLAALSGRGMPSLRGREPLADTARYYYTGHLAAQTRYPDGLRVILAEYFEVPVAVEEYVGQWLELPERSRLGVDSTSLGMDVCLGTHVWDRQHKFRLRLGPLDLDQYQRFLPDGDHFVELAAWVAEYLGEELDWDVNLVLQRHEVPPLGLQGGGRLGFNTWLGDPGQDARDLLLARQYATARPHEHKEKEHE |
1E6V Chain:A ((273-552)) | --RRARGENEPGGVPFGVLADC-------------------------VQTMRK-----------YPDDPAKVALEVIAAGAMLYDQIWLGSYMSGGV---GFTQYAT--------AVYPDNILDDYVYYGLEYVEDKY-GIA------EAEPSMDVVKDVATEVTLYGLEQYERYPAAMET--HFGGSQRAAVCAAAAGCSTAFATGHAQAGLNGWYLSQILHKEGQGRLGFYGYAL-QDQCGAANSLSVRSDEGLPLELRGPN-YPNYAMNVGHLGEYAGIVQAAHAARGDAFCVHPVIKVAFADENLVF-----------DFTEPRKEFAKGALREFEPAGERDLIVPA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -82556 for 2499 contacts (-33.0/contact) +
2D Compatibility (PS) -29096 + (NN) -13641 + (LL) 3204
1D Compatibility (HY) -1600 + (ID) 2200
Total energy: -125889.0 ( -50.38 by residue)
QMean score : 0.175
|
|
|