Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPIFPAAPPGSTGSRAVRCRSTERGGPDMELLNATPLAAAYNQGLDAEGRESLVVIAKGSFDLPLDGREARLLDEQQTLLMVDEFYGEPGFSAPRRECEFVPFKPFCDVLVLGSAQAPGGRPVQQLTAGIRVGRVSKALTVHGPRQWEPGLLGAGAGVAQPFQSQDISYASAFGGSHASPDNPGFMDCYM--ANPAGCGWFPRSADTAEIVGTPMPATEKLGEPVDSPHGRFTPMALGPLGRHWQARVGFAGRYDDAWLAERFPFLPADFDERYFQSAPADQWTDHLRGGEEVLLLNLTGEERAAFRVPRREVPVTFFLKKGGHETAQARIDTLLVDCDARRVEVTWRIRRPLKRNLFEIAQVLVGSKSAAWWRARELGKDYYPSLAALARSRQAEEDEA |
| 1I1R Chain:A ((2-302)) | ---------LLDPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANY----IVWKTNHFTIP--KEQYTIINRTASSVTFTDIASL-------------------NIQLTCNILTFGQLEQNVYGITIISGL--------------------------------------------PPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKS------VIILKYNIQYRTKDASTWSQIP--------------PEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17509 for 2217 contacts (7.9/contact) +
2D Compatibility (PS) -31283 + (NN) -7903 + (LL) 5792
1D Compatibility (HY) 0 + (ID) 1400
Total energy: -17285.0 ( -7.80 by residue)
QMean score : 0.092
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