Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEVYAN---NMEISCKAANGKSIAAFPDVCFTPPQAPPTPLGVPIPYPNTGLSKDTTKGTRTIRITRKEVMLKNKSYYKTSYGDEPGRA-PKKGIVTSKIKGKVYFTSWSMNVKFESKNVVRHLDLTTHNHASFPGNTPVWPYLDQATVDAGGGPCSNEVKKEKKDCADFKPHGSKDACAGLGAGKPSGKKTSNEADRLADKVAARKCLTARRCALQPYKPNSCCPQQTAHHLIEASALHDKGRGGKGSVPLKGISNYSENKAPCVCAEGVNQNVGTHGLMHTFQSAAAAKSRSGTLQLSNGSSISAKKTTYGTAKRQSMAAMGKVFPQSKCSKECLSAQLDNYHKQCGINARTPIKAVETGQTDVTAATQAIKTRNARLGATRSRVR |
| 4J72 Chain:A ((20-363)) | FAFNVLKYITFRSFTAVLIAFFLTLVLSPSFINRLKKYTPTMGGIVI---LIVVTLSTLLLMRWDIKYTWVVLLSFLSFGTIGFWDDYVKLKNKKGI--------------SIKTKFLLQVLSASLISVLIYYWADIDTILYFPFFKELYVDLGVLYLPFAVFVIVGSANAVNLTDGLD-----GLAIGPAMTTATALGVVAYAVGHSKIAQYLN---IPYVPYA------GELTVFCFALVGAGLGFLWFNSFPAQMFMG--------------DVGSLSIGASLATVALLTKSEFIFAVAAGVFVFETISVILQIIYFRWTGGKRLFKRAPFHH--------HLELNGLPEPKIVVRMWIISILLAIIAISMLK-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4J72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 174740 for 2812 contacts (62.1/contact) +
2D Compatibility (PS) -32325 + (NN) 1993 + (LL) 4192
1D Compatibility (HY) -11600 + (ID) 2350
Total energy: 134650.0 ( 47.88 by residue)
QMean score : -0.025
|
|
|