Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHVSKVFPSLRDTLPRDLMASVVVFLVALPLCMGIAIASGMPPAKGLLTGIVGGLVVGFLAGSPLQVSGPAAGLAVLVFELVRTYGVAML------GPILLLAGAIQLLAG--RLRLGCWFRVTSPAVVYGMLAGIGILIVLSQLHVMLDLAPKASGLDNLL------AFPQAAFA---ALGSLGMDSGLDAALLGLGTIAVMWGWDKLR-PQRLRFLPGALLGVSLATLASLWLALDVRRVEVPANLGEAIVWLRPADLLALADPSLLLAAVVVAFIASAETLLSAAAVDRLHDGPRSDMDRELSAQGVGNMLCGLLGALPMTGVIVRSSANVNAGARTRASAIFHGLWLLAFVLLLGSLLRQIPVASLAGVLVYTGVKLVD-FKALGNLSRYGRMPMLVYAATALAIVFTDLLTGVLVGFALTLLKLVLKAARLKIALRYTGEHEAELRLSGAATFLKVPALSRVLDEVKPGTTLHVPMDNLS-YVDHACMELLEDWGRMAPVQGSRLVIEPRALKRRLEGRLRGSVGLGGARNGGAVSPG |
| 4CP6 Chain:A ((13-417)) | --------TKVGSIIQQNNIKYKVLTVEGN-IGTVQVGNGVTPVE-FEAGQDGKPFT---IPTKITVGD-------KVFTVTEVASQAFSYYPDETGRIVYYPSSITIPSSIKKIQKKGFHGSKAKTIIFDKG---------SQLEKIEDRAFDFSELEEIELPASLEYIGTSAFSFSQKLKKLTFSSSSKLELISHEAFANLSNLEKLTLPKSVKTLGSNLF----------RLTTSLKHVDVEEGNES---FASVDGVLFSKDKTQLIY-------------YPSQKNDESYKTPKE------------------------TKELASYSFNKNSYLK---------------KLELNEGLEKIGTFAFADAIKLEEISLPNSLETIERLAFYGNLELK-------ELILPDNVKNFGKHVMNGLPKL------------------KSLTIGNNINSLPSFFLSGVLDSLK---EIHIKNKSTEFSVKKDTFAIPET---------VKFYVTSEHIKDVLKSNLSTSNDIIVEKV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -372150 for 3074 contacts (-121.1/contact) +
2D Compatibility (PS) -39072 + (NN) 11544 + (LL) 10948
1D Compatibility (HY) -14000 + (ID) 3600
Total energy: -406330.0 ( -132.18 by residue)
QMean score : 0.185
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