Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGATRKPGF---TVAVLATLLAAVVVLLGAYTRLTHAGLGCPDWPGCYGFVHVP---------LSEAQLAHAELHFPDAPVEAQKGWNEMIHRYFAGAL-GLLILGLALHALVRRGRDGQPLKLPLLLLAVVIAQA---AFGMWTVTLKLW----------PQVVTAHLLGGF----TTLALLFLLAL------RLSGR--------------FA--ARRYPAATRGLAGLALLLVIG------------------------QIALGGWVSSNYAA---VACIDLPTCHGEWWPRMDFANGFHLTQHIGPNYLGGQLDSDARTAIH-MTHRIGALCVTLVLLLLAWRLQRSGLVWPTALMLLGLSLQIGLGISNVLLHLPLPVAVAHNGGGALLLLSLVL-----------------VNYRLRAPASVRAPAPSPQRVRRTLPPAQGSRLKAA--------------------------------------------- |
| 4GA6 Chain:A ((1-493)) | MKAKIRILDMFSGRYTVLINEEDAKEAKLHPDDLVKIE----AGKKAVYGSVALSNLVGKGEVGISRDVLDLHNFS-EGETVSVIPAGTPESVRYIKKKMHGEKLRKVEIEAIVRDIVDRKLRDIEISSFVTALEINGLDMDEIAALTIAMAETGDMLDIDRKPIMDVHSIGGVPGNKTNILVVPIVAAAGLTIPKTSSRAITSAAGTADVVEVFADVSFSLDEIKRIVEKVGACLVWGGALNLAPADDITIKAERALSIDPTGLMLASIMSKKYAMGSQYVLIDIPTGKGVKVETVEEARSLARDFIELGKRLGQYVEVAITYGGQPIGHTVGPALEAREALSALMTGKGPGSLIEKATGLAGILLEMG-GVAPAGTGKKMAKEILESGKAWEKMKEIIEAQGGDPNIKPEEIPIGDKTYTFTAATSGYVTAIDNRAITAIARAAGAPEDKGAGIELYVKVGEKVKEGDPLFTIHAEHEARLDQAIVLARRTEPIRIE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -270192 for 2653 contacts (-101.8/contact) +
2D Compatibility (PS) -36703 + (NN) -9492 + (LL) 196
1D Compatibility (HY) -8800 + (ID) 3150
Total energy: -328141.0 ( -123.69 by residue)
QMean score : 0.256
|
|
|