Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKWTRKAAADLDAIYDHYVVLIGPEKALKAVQDIVEQVK-PLQQVANQ-GAGRPSEVPGVRTLTLERWPFSAPFRVKGKEIQILRIDRVE-ITP---
3KXE Chain:A ((2-95))
KPYRLSRRAKADLDDIWTYSEQRWGVEQAADYARELQATIEMIAEH--PGMGQPDENLRAGYRRCASGS---HVVFYRVGVRVEIIRVLHQSMNARAHL
General information:
TITO was launched using:
RESULT:
Template:
3KXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2498 for 550 contacts (-4.5/contact) +
2D Compatibility (PS) -9356 + (NN) -2237 + (LL) 484
1D Compatibility (HY) 3600 + (ID) 600
Total energy: -10607.0 ( -19.29 by residue)
QMean score : 0.176
(partial model without unconserved sides chains):
PDB file :
Tito_3KXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KXE-query.scw
PDB file :
Tito_Scwrl_3KXE.pdb
: