Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQIELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVALEKPSSQ-EQGQWY----------------FQRYI--QHLPTAGEMVFFDRSWYNRAGVERVMG---FCSPLQYLEFMRQAPE--LERMLTNSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTDTADAPWTVIKSDDKKRARLNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKVYAEAAAAPGHANLDIPA |
| 2JAQ Chain:A ((1-200)) | ------------------------------------------------------------MKIAIFGTVGAGKSTISAEISKKL---GYEI--FKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARSKQLK-------NIIFDRTLLEDPIFMKVNYDLNNVDQTDYNTYIDFYNNVVLEN----KLSFDIVIYLRVSTKTAISRIKKRGRSEEL--------LIGEEYWETLNKNYEEFYKQNV-YDFPFFVVDAELD---VKTQIELIMNKLNSI--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38820 for 1139 contacts (-34.1/contact) +
2D Compatibility (PS) -17604 + (NN) -7497 + (LL) 7908
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -64563.0 ( -56.68 by residue)
QMean score : 0.459
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