Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVY-VGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGYKR-DRNLGTYLSRSYEGRYVGGFLAAKMTRS---HKIGYIASFPIPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALIDQGVDVVFQHTDSPA--PIQAAERR-----GVYAVGYASDMQHF-----GPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSE-DFWGGLAESTVVLP-LNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
| 2FQX Chain:A ((3-314)) | --------------------------------GDFVVGMVTDSGDIDDKSFNQQVWEGISRFAQEN-N-AKCKYVTASTD-AEYVPSLSAFADENMGLVVACGSFLVEAVIETSARFPKQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAKEAGKSAVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGTGNGVIKEARDRRLNGQDVWVIGVDRDQYMDGVYDGSKSVVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGLEDKAVGIPEEN-PNLSSAVMEKIRSFEEKIVSKEIVVPVRSARMMN-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FQX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137984 for 2683 contacts (-51.4/contact) +
2D Compatibility (PS) -32391 + (NN) -14604 + (LL) 5304
1D Compatibility (HY) -12400 + (ID) 3250
Total energy: -195325.0 ( -72.80 by residue)
QMean score : 0.583
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