Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYEWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVETLRKAYAFNN-LQEFLDL----YYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQ------------THTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRH----------LSEEQAQKTLDQALPFRDAFIAVGLDSSEVGHPPSKFQ---RVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFGGYVTENFHALQQSLGMTEEQARRLAQNSLDARLVK |
| 3T1G Chain:A ((11-336)) | --------PKVELHVHLSGAIKPETILYFGKKRGIALPADTVEELRNIIGMDKPLSQPGTLAKWDYYMPV-IAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPWNQTEGDVTPDDVVDLVNQGLHEGEQAFGIKVRSILCCMRHQPSWSLEVLELCKKYNQKTV----------VAMDLIGDETIEGSSLFPGHVEAYEGAVKNGIHRTVHAGEFGSPEVVREAVDILKTERVGHGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNTDAPLEFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T1G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145125 for 2530 contacts (-57.4/contact) +
2D Compatibility (PS) -31936 + (NN) -14629 + (LL) 1556
1D Compatibility (HY) -19600 + (ID) 4450
Total energy: -214184.0 ( -84.66 by residue)
QMean score : 0.468
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