Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHPSHVRALCASLCLGAGLPVHAGHVHAGQGFLEDAKASLTARNFHLHRNFVGDASQGKAEEWTQSFILDARSGFTQGSVGFGLDVLGLYSLKLDGGKGTAGTQLLPIHDDGRPADDFGRLAVAGKLRVSNSELKIGEWMPVLPILRSDDGRSLPQTFRGGQLSANEIAGLTLYAGQF-RGNSPRNDASMQDMSLFGRPAATSDRFDFAGGEYRFNGERSLLGLWNAELKDIYRQQYLQLQHSQPLG-DWLLGANLGGFRGRDAGSARAGKLDNRTVSALFSARYGLHTLYLGLQKVSGDDGWMRV---NGTSGG----TLANDSYNASYDNPGERSWQLRYDFDFVGLGLPGLTFMTRYLHGDHV------------RLAGVTDDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQR--RDWGSNTRFDENRLIVSYPLSLL |
| 3SY7 Chain:A ((11-420)) | ------------------------------KGFIEDSSLDLLLRNYYFNRD--------DRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGT------------------DDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTE-----------ELYA-TYAGETAKSADFIGGRYAITDNLS-ASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFG---GAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANADQGEGDQ-NEFRLIVDYPLSIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1718 for 2701 contacts (0.6/contact) +
2D Compatibility (PS) -35423 + (NN) 2014 + (LL) 2264
1D Compatibility (HY) -21600 + (ID) 7200
Total energy: -58227.0 ( -21.56 by residue)
QMean score : ?
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