Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKINKSRLALAITAGTLGALAQQAVAAGFIEDSKASLTLRNFYINTDNRNGTASPSKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRLDGGGRAGKSGLDRQPGTVFPLESNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQIGPG-VLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGS---TAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTAR--------------GDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSGLPAAGSSNNQRDQDENRLIVSYTLPLL |
| 3SY7 Chain:A ((4-420)) | ----------------------VSDQAEAKGFIEDSSLDLLLRNYYFNRD------D---RVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGT-------------------------DDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTE-----------ELYATYAGETAKSAD-----FIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGK--------------------AKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFG---GAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHR-----ANADQGEGDQNEFRLIVDYPLSIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17391 for 2862 contacts (6.1/contact) +
2D Compatibility (PS) -37324 + (NN) -7238 + (LL) 1084
1D Compatibility (HY) -26400 + (ID) 6750
Total energy: -59237.0 ( -20.70 by residue)
QMean score : 0.307
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