Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVLKMTDLDLKGKRVLIREDLNVPVKDGQVQSDARIKAALPTLKLALEKGA-AVMVCSHLGRPTEGEFSAENSLKPVAEYLSKALGREVPLLADYLDGVEVK-------AGDLVLFENVRFN---------------KGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVARFAKVAAAGPLLAAELDALGKALGNPARPMAAIVAGSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAAAGH-KVGKSLYEADLVETAKAIAAK-----VKVPLPVDVVVAKEFAESAVATVKAIAE-VADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIADSAA---FSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILEQRAKG |
4O3F Chain:A ((7-416)) | ---LTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAAELKSLLGKDVLFLKDCV-GPEVENACANPAAGTVILLENLRFHVEEEGKGKDASGNKVKAEPAKIDAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQK--AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLYDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGTESSKKYAEAVGRAKQIVWNGPVGVFEWEAFARGTKSLMDEVVKATSRGCITIIGGGDTAT--------DKVSHVSTGGGASLELLEGKVLPGVDALSNV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253934 for 3270 contacts (-77.7/contact) +
2D Compatibility (PS) -39402 + (NN) -9418 + (LL) 1624
1D Compatibility (HY) -35200 + (ID) 8050
Total energy: -344380.0 ( -105.31 by residue)
QMean score : 0.556
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